Browse of TCMCG002C24941 protein

CDS

Accession Number	TCMCG002C24941
gbkey	CDS
Protein Id	XP_020107092.1
Location	complement(join(852680..852791,852920..853302,853488..853634,854330..856216))
Gene	LOC109723216
GeneID	109723216
Organism	Ananas comosus

Protein

Length	842aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020251503.1
Definition	probable E3 ubiquitin-protein ligase HERC2 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	DZ
Description	Transcription factor BRX N-terminal domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005085        [VIEW IN EMBL-EBI] GO:0005086        [VIEW IN EMBL-EBI] GO:0005088        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005543        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005794        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008289        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0017016        [VIEW IN EMBL-EBI] GO:0017112        [VIEW IN EMBL-EBI] GO:0017137        [VIEW IN EMBL-EBI] GO:0019899        [VIEW IN EMBL-EBI] GO:0031267        [VIEW IN EMBL-EBI] GO:0035091        [VIEW IN EMBL-EBI] GO:0043167        [VIEW IN EMBL-EBI] GO:0043168        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0051020        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065009        [VIEW IN EMBL-EBI] GO:0070300        [VIEW IN EMBL-EBI] GO:0098772        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCACATAAAAGGGGAGTCATCAGATATTTTGAGAGCGAGTGTTTCTAGTGCTCCTAGCACATCCAGTCATGGTTCTATACAAGATGACTGCGAATCTCTAGGAGATGTATATGTGTGGGGTGAGGTTTTCTGTAATAGTTCCACTGGGAATATTTCTAACAAAATTAGCAGTTCTACCTGTTGTAGAGCAGATTTCCTTTTACCTAAGCCCTTGGAATCAAACTTACTTCTAGACGTCCACCACGTGGCCTGTGGAGTACATCACGCTGCCCTTGTTACAAAACAAGGAGAGGTCTTTACATGGGGTGAAGAATTTGGCGGCTGTCTTGGCCAGGGAGTTAGAAGTGATGTTATTCACCCTCATCTGGTTGAATCGTTATCGGACTGTAATGTAGAGATTGTTGCTTGCGGAGAATTCCACACTTGTGCTGTTACCATAACTGGTGAACTTTATACTTGGGGAGATGGAACGCACAATCTAGGGCTATTGGGTCATGGTACTAATATAAGCCATTGGATACCCAAGAGAGTTTCAGGACCACTTGATGGGCTTCATGTTGCTTATGTTACATGTGGCACCTGGCATACAGCCTTGATCACTTCAACTTGGCGACTATTCACTTTTGGCGATGGAACTTTTGGTGCTTTAGGTCATGGAAGCCAAGAAAGTATTTTGTATCCAAAAGAAGTAGAATATTTTATGGGTTTGAAGACGATTTCCGTTGCCTGTGGTGTATGGCACACTGCTGCCGTTGTAGAGGGTATAAGTACTAATTCCGGTGTGAATTTTTCATCTGGAAAGTTGTTTACTTGGGGAGATGGAGACAAGTACCGCCTCGGCCATGGCGACAGGGAGCCACGGTTTAAGCCTACTTGTGTTGCTTCAATAGTTGACTGCGATTTTCACAAGGTAGCTTGTGGGCATAATCTCACTATTGGGTTGACAACTTATGGACAAGTCTTTACCATGGGCAGTGCTGTTTATGGGCAGCTTGGAGACCCCTGTTCTGATGGGAAGCTCCCTTGTTTAGTCGAAGATGAGCTTCTTGGGGAAGCTGTTGCAGAAATTGCTTGTGGCTCACACCATGTTGCAGTTTTGACAACTAAGAGTGAAGTTTTTACATGGGGAAGAGGAGCCAATGGGAGGTTGGGCCATGGCGATATTGAAGATAGGAAAACACCTATAAAAGTTGAGGCTTTGAGGGATAGATCTGTTAGATATATAGCTTGTGGTGCAAACTTCACTGTTGCTATTTGCCAACACAAATGGGTTTCAGGTTCAGAGCAGTCTCGGTGCGGCTTATGTGGACAGCCATTTGGGTTTACTCGAAAGAGGCATAATTGCTACAACTGCGGACTTGTCTACTGCCATCCATGCACCTCCAATAAGTCTTTTAGAGCAGCTTTGTCTCCTAACCCTGGAAAACCATATCGTGTTTGTGACTCTTGTTATGTAAAATTGAATAAAGTAGTGGCCTTTGGTGGAACTTTCAATAACAAGAAAGATGCTACTCCTTACATCTCAAGCAAAGAGAGGCTTGACAAAGATTATGTGATGAAGAATTTGGATATGAAGGCAGCTAAAAGTTGGAAGAGAACTATTATCCTGGTTCCTCAAATTAGTTCAGTGTTGCAACTAAAAGACATAGTTTTTGCAGGTGGAATTGATTCAAAAATTGCGGATTCGAAAGCAGTTTGGACACTGGTTGGTCAATCTGTAAATTCTTCAAGAGCTGTTTCGCCCTTCTCACAAAATCCTAGCCCTGTGCGTTCTGCAACACCAGTTCCCTTGAATGAAGACCTTTCTTTCTATAAAAGTGCCGCTGATAATCTTAAAAAAGCAAATGAGCTCCTGGAGCAAGAAATCAAAAAATTGCAAGCTCAGGTTGATATTTTGAGACACCGTTGTGATCTTCAAGAAATTGAGTTGGAGAAATCAGCAAAGAAAGCCCAAGAGGCTATGGTGGTGGCTGCAGAGGAATCTGCTAAATCCAATGCTGCGAAAGAAGTTATAAAATCCCTAACAATACAGCTTAAAGATATGGCAGAAAGATCGCCTCAAGGTGTTGTCGAAGGTAAGGAGAGAAAATCAAGCATGGAGGCATATAATACTCATCACGCTAGTATGAACAGATCGATCCAAACAATGATTCAAAATGGAGTAGACGAACAAATGAAGGGTAGTGAGTCCAATGGTGACAAAGAGATGCTAAAATTAGACAGTCCTGCAGATGACAATGTTTGCAGGGAAGCTAAGTTCACTAAAGACGGTGAAAATGGTTCCAAGTCTCAAAGCTCAATTTCAACTAGTAATCAAGTCGGGGCAGAGTGGATCGAACAGTATGAATCGGGCGTATATATTACTCTCTCGGCCCTACATGATGGAACTCGGGATATTAAGAGGGTTCGTTTCAGTCGAAGAAGATTTAAAGAGCAGCAAGCGGAAGTGTGGTGGTCTGAGAACCGCAAAAAGGTTTTCGAGAGATACAATGCTCGTGGGTCCTGCACGGCCTCATCGATGGCCTGA

Protein:   MHIKGESSDILRASVSSAPSTSSHGSIQDDCESLGDVYVWGEVFCNSSTGNISNKISSSTCCRADFLLPKPLESNLLLDVHHVACGVHHAALVTKQGEVFTWGEEFGGCLGQGVRSDVIHPHLVESLSDCNVEIVACGEFHTCAVTITGELYTWGDGTHNLGLLGHGTNISHWIPKRVSGPLDGLHVAYVTCGTWHTALITSTWRLFTFGDGTFGALGHGSQESILYPKEVEYFMGLKTISVACGVWHTAAVVEGISTNSGVNFSSGKLFTWGDGDKYRLGHGDREPRFKPTCVASIVDCDFHKVACGHNLTIGLTTYGQVFTMGSAVYGQLGDPCSDGKLPCLVEDELLGEAVAEIACGSHHVAVLTTKSEVFTWGRGANGRLGHGDIEDRKTPIKVEALRDRSVRYIACGANFTVAICQHKWVSGSEQSRCGLCGQPFGFTRKRHNCYNCGLVYCHPCTSNKSFRAALSPNPGKPYRVCDSCYVKLNKVVAFGGTFNNKKDATPYISSKERLDKDYVMKNLDMKAAKSWKRTIILVPQISSVLQLKDIVFAGGIDSKIADSKAVWTLVGQSVNSSRAVSPFSQNPSPVRSATPVPLNEDLSFYKSAADNLKKANELLEQEIKKLQAQVDILRHRCDLQEIELEKSAKKAQEAMVVAAEESAKSNAAKEVIKSLTIQLKDMAERSPQGVVEGKERKSSMEAYNTHHASMNRSIQTMIQNGVDEQMKGSESNGDKEMLKLDSPADDNVCREAKFTKDGENGSKSQSSISTSNQVGAEWIEQYESGVYITLSALHDGTRDIKRVRFSRRRFKEQQAEVWWSENRKKVFERYNARGSCTASSMA